The Cloudflare plugin is installed using the default 'x3' theme, as well as the new 'Paper Lantern' theme. If you utilize a custom theme or have alternate themes installed, the following command can be used to install the Cloudflare plugin:
bash <(curl -s https://raw.githubusercontent.com/cloudflare/Cloudflare-CPanel/master/copy2theme.sh) BASE_THEME ALTERNATE_THEME
BASE_THEME should be either 'x3' or 'paper_lantern', based on what theme the alternate was based on.
ALTERNATE_THEME with the folder name of the alternate theme on your server. This folder should be located at